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Bioinformatics & Computational Biology
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1.
Gene fusions in cancer: Classification of fusion events and regulation patterns of fusion pathway neighbors
Keyword:
Cancer
,
semi-supervised machine learning
,
gene fusion
,
Machine Learning
, and
chromosomal abnormalities
Creator:
Hughes, Katelyn
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2016-05-05
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
2.
Designing a realistic virtual bumblebee
Keyword:
virtual
,
bumblebee
,
netlogo
,
agent-based modeling
, and
optimal forage theory
Creator:
Marsden, Timothy
Advisor:
Ryder, Elizabeth F.
Publisher:
Worcester Polytechnic Institute
Date Created:
2016-02-09
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
3.
Leveraging Omics Data to Expand the Value and Understanding of Alternative Splicing
Keyword:
Omics
and
Alternative Splicing
Creator:
Johnson, Nathan T.
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-08
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Bioinformatics & Computational Biology
4.
Propensity of Endogenous Alternative Splicing to Mediate Mutative Damage
Keyword:
Mutation
,
Alternative Splicing
,
Cancer
,
mRNAseq
,
Statistics
, and
Machine Learning
Creator:
Lutz, Ashley
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-25
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
5.
Studying inter- and intra-tumor heterogeneity of triple-negative breast cancer
Keyword:
unsupervised learning
,
clustering
,
TNBC
, and
cancer
Creator:
Leshchyk, Anastasia
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-28
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
6.
Simulations of Different P-values Combination Methods Using SNPs on Diverse Biology Levels
Keyword:
statistical power
,
haplotype block
,
p-value combination methods
,
Omni-TFisher
, and
GEFOS
Creator:
Zhang, Ruosi
Advisor:
Wu, Zheyang
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-05-30
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
7.
Genome Studies of Gene Expression and Alternative Splicing During iPSC Skeletal Muscle Induction and Differentiation
Keyword:
Iso-Seq
,
novel genes and transcripts
,
FSHD
,
differential expression
,
functional analysis
, and
iPSC
Creator:
Wu, Yibo
Advisor:
Wu, Zheyang
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-05-31
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
8.
In Silico Edgetic Profiling and Network Analysis of Human Genetic Variants, with an Application to Disease Module Detection
Keyword:
Next Generation Sequencing
Creator:
Cui, Hongzhu
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-05-18
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Bioinformatics & Computational Biology
9.
Analysis of the Relationship Between Co-localization of Proteins in Protein Assemblies and Protein Proximity in 3-D Space
Creator:
Xie, Longsheng
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-05-18
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
10.
ELUCIDATION OF PERSISTENT MUTATIONAL LANDSCAPE IN SARS-CoV-2 MAIN PROTEASE: A STRUCTURAL BIOINFORMATICS ANALYSIS
Keyword:
SARS-CoV-2, Main Protease, spatial-temporal, mutation, persistent, selection, molecular dynamics
Creator:
Mkandawire, Winnie
Advisor:
Korkin, Dmitry
and
Schiffer, Celia
Publisher:
Worcester Polytechnic Institute
Date Created:
2021-05-06
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
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9
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Unit (Department)
Bioinformatics & Computational Biology
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17
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Worcester Polytechnic Institute
17
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Thesis
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https://creativecommons.org/licenses/by-nc/4.0/
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