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Filtering by: Advisor Korkin, Dmitry Remove constraint Advisor: Korkin, Dmitry Unit (Department) Bioinformatics & Computational Biology Remove constraint Unit (Department): Bioinformatics & Computational Biology Resource type Thesis Remove constraint Resource type: Thesis

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Patterns of Viral Signal Peptide Sequences and their Corresponding Hosts

Keyword:

Virus, Viral-host evolution, Phylogeny, and Signal peptides

Creator:

Le, Ann-Elizabeth V.

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2020-09-20

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
A landscape of population-specific variation effects on ligand binding site in the healthy population

Creator:

Sun, Mo

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2021-04-28

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
ELUCIDATION OF PERSISTENT MUTATIONAL LANDSCAPE IN SARS-CoV-2 MAIN PROTEASE: A STRUCTURAL BIOINFORMATICS ANALYSIS

Keyword:

SARS-CoV-2, Main Protease, spatial-temporal, mutation, persistent, selection, molecular dynamics

Creator:

Mkandawire, Winnie

Advisor:

Korkin, Dmitry and Schiffer, Celia

Publisher:

Worcester Polytechnic Institute

Date Created:

2021-05-06

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Analysis of the Relationship Between Co-localization of Proteins in Protein Assemblies and Protein Proximity in 3-D Space

Creator:

Xie, Longsheng

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2020-05-18

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Studying inter- and intra-tumor heterogeneity of triple-negative breast cancer

Keyword:

unsupervised learning, clustering, TNBC, and cancer

Creator:

Leshchyk, Anastasia

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2019-04-28

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Propensity of Endogenous Alternative Splicing to Mediate Mutative Damage

Keyword:

Mutation, Alternative Splicing, Cancer, mRNAseq, Statistics, and Machine Learning

Creator:

Lutz, Ashley

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2019-04-25

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Gene fusions in cancer: Classification of fusion events and regulation patterns of fusion pathway neighbors

Keyword:

Cancer, semi-supervised machine learning, gene fusion, Machine Learning, and chromosomal abnormalities

Creator:

Hughes, Katelyn

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2016-05-05

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology

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Creator

Hughes, Katelyn1
Le, Ann-Elizabeth V.1
Leshchyk, Anastasia1
Lutz, Ashley1
Mkandawire, Winnie1
more Creators »

Advisor

Korkin, Dmitry[remove]7
Schiffer, Celia1

Contributor

Kondashov, Fyodor1
Korkin, Dmitry7
Manning, Amity L.2
Ryder, Elizabeth F.4
Schiffer, Celia1
more Contributors »

Unit (Department)

Bioinformatics & Computational Biology[remove]7

Publisher

Worcester Polytechnic Institute7

Resource type

Thesis[remove]7

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