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Tuzel, Erkan
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Accelerating SRD Simulation on GPU
Keyword:
GPU acceleration
,
CUDA programming
, and
SRD simulation
Creator:
Chen, Zhilu
Advisor:
Huang, Xinming
Publisher:
Worcester Polytechnic Institute
Date Created:
2013-04-17
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Electrical & Computer Engineering
Catalytic and Electrocatalytic Pathways in Fuel Cells
Keyword:
reaction route graph theory
,
water gas shit
,
hydrogen oxidation
,
methanol decomposition
,
electrocatalysis
,
fuel cell model
,
ammonia decomposition
,
Fuel Cells
,
Catalysis
,
Methane Steam Reforming
, and
oxygen reduction
Creator:
Vilekar, Saurabh A.
Advisor:
Datta, Ravindra
Publisher:
Worcester Polytechnic Institute
Date Created:
2010-04-19
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Chemical Engineering
From All-Atom Molecular Mechanics to Coarse- Grained Lattice Models: Computational Approaches to Problems in Protein Biochemistry
Keyword:
force field
,
protein pka
, and
computational chemistry
Creator:
Cvitkovic, John Peter
Advisor:
Kaminski, George A.
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-24
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Chemistry & Biochemistry
Phylogenetic Characterization of the Kinesin Superfamily and Functional Analysis of PpKin14-Vs in Physcomitrella patens
Keyword:
moss
,
PpKinesin14-Vs
,
chloroplast photorelocation
,
intracellular motility
,
microtubule
,
gene knockout
,
phylogenetic analysis
, and
kinesin
Creator:
Shen, Zhiyuan
Advisor:
Vidali, Luis
Publisher:
Worcester Polytechnic Institute
Date Created:
2014-01-30
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Biology & Biotechnology
A Coarse-Grained Computational Model of Kinesin-Microtubule Gliding Assays on Lipid Bilayers
Keyword:
microtubules
,
kinesin
, and
biophysics
Creator:
Vandal, Steven R.
Advisor:
Tuzel, Erkan
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-12-15
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Physics
Three-dimensional Model to Understand the Cooperative Transport of Kinesin Molecular Motors in DNA-origami Complexes
Creator:
Youyen, Wiphu
Advisor:
Tuzel, Erkan
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-08-19
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Physics
Mesoscale modeling of biological fluids: from micro-swimmers to intracellular transport
Keyword:
cilia
,
microscopy
,
MPCD
,
tetrahymena
,
FRAP
, and
Brownian dynamics
Creator:
Mousavi, Sayed Iman
Advisor:
Tuzel, Erkan
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-08-20
Resource Type:
Dissertation
Degree:
PhD
Understanding Mechanical Properties of Bio-filaments through Curvature
Keyword:
actin
,
microtubule
,
simulation
,
persistence length
,
bending
, and
gliding assay
Creator:
Wisanpitayakorn, Pattipong
Advisor:
Tuzel, Erkan
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-08-20
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Physics
Developing and validating Fuzzy-Border continuum solvation model with POlarizable Simulations Second order Interaction Model (POSSIM) force field for proteins
Keyword:
Protein force field
,
Polarizable force field
,
Protein pKa
, and
Continuum solvation model
Creator:
Sharma, Ity
Advisor:
Kaminski, George A.
Publisher:
Worcester Polytechnic Institute
Date Created:
2015-10-13
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Chemistry & Biochemistry
Developing and Validating a Complete Second-order Polarizable Force Field for Proteins
Keyword:
Protein force field
,
torsional fitting
,
many-body energy
, and
polarizable force fields
Creator:
Li, Xinbi
Advisor:
Kaminski, George A.
Publisher:
Worcester Polytechnic Institute
Date Created:
2015-04-27
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Chemistry & Biochemistry
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PhD Dissertations
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Creator
Chen, Zhilu
1
Cvitkovic, John Peter
1
Li, Xinbi
1
Mousavi, Sayed Iman
1
Sharma, Ity
1
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Datta, Ravindra
1
Huang, Xinming
1
Kaminski, George A.
3
Tuzel, Erkan
4
Vidali, Luis
1
Contributor
Datta, Ravindra
1
Deskins, N Aaron
1
Dittami, James P.
2
Duffy, Joseph B.
1
Grimm, Ronald
1
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Unit (Department)
Biology & Biotechnology
1
Chemical Engineering
1
Chemistry & Biochemistry
3
Electrical & Computer Engineering
1
Physics
3
Publisher
Worcester Polytechnic Institute
10
Resource type
Dissertation
8
Thesis
2
